CDS

Accession Number TCMCG057C17783
gbkey CDS
Protein Id XP_018485230.1
Location complement(join(16134954..16135064,16135173..16135276,16135356..16135470,16135569..16135616,16135702..16135791,16135886..16135960,16136050..16136202,16136289..16136373,16136460..16136530,16136632..16136682,16136862..16137278,16137362..16137493,16137592..16137705,16137791..16137908,16138028..16138086,16138168..16138237,16138341..16138474,16138569..16138757,16138829..>16139553))
Gene LOC108855817
GeneID 108855817
Organism Raphanus sativus

Protein

Length 954aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018629728.1
Definition PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K00960        [VIEW IN KEGG]
ko:K10908        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0000959        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006390        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034245        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
TCCCCTGCCGCGCCTTCTCCTCCTTCTCTCTCCTTAAACCATACCTCTCACTTCCAACACCGAACTTCCCTAATCACCTGGCTTAAACCTCCTCCTCCTTCCTCCTCCTCCCTCTTCCGCCGCAGACCCCTCTTACTTCCCATCTCAGCATCTTCCTCCTCTTCCACCTCTCTCTCAATCACCAAAGGAGCCACCTTGATCGAAGATCCCGTGGAAAGGAACGAGCTTTCCGCGAGGAGGAGACTCTTCACGCAAGACCCACCATGGATCTCCGCCCTGTTCCTCAAGGGTCTGACCAGAACCCTCGACCAGACTCTGAAACTCGAGAGGCAAGACATGGGCAAGAGAAAGTTCGATTCTTTGAGGAGGCGGCAGGTGAAGGAAGAGACGGAGGCGTGGGAGAAGACGGTTGAGGAGTACAGAGACTTGGAGAAGGAGATGTGCGAGAAGTCTCTCGCTCCGAACTTGCCTTACGTGAAACACATGTTCTTGGGTTGGTTCCAGCCGCTGAAAGACGTGATTGAGAGGGAGCAGAGGCTGCAGAAGAACAAGAGCAAGAAGGTCAGAGCGGCTTATGCTCCCCACATCGAGCTCTTGCCTGCTGATAAAATGGCGGTTATTGTGATGCATAAGATGATGGGTTTGGTTATGTCGGGACATGAGGATGGGTGTATACAAGTTGTTCAAGCTGCTGTTAGTATCGGCATAGCTATAGAGCATGAGGTGAGGATTCATAACTTCTTGAAGAGAACTCGGAAGAGCAACACAGGGGACTCACAAGAGGAAGTGAAGGATAAGCAATTGCTTAGGAAACGTGTTAACAGTTTGATTCGTAGAAAAAGGATTATCGATGCACTAAAAGTGGTGAAAAGTGAAGGTATCAAACCTTGGGGGCGAGCTACACAAGCTAAGCTTGGAAGCCGTCTGCTAGAACTATTAATCGAAACAGCTTATGTGCAACCTCCTCTGACCCAGTCAGGGGACTCTATACCCGAGGTTCGACCTGCATTCAGACACAAGTTTAAAACTGTGACCAAATATCCAGGGTCTAAGTTGGTGAGGAGGTACGGAGTTATTGAATGTGACTCACTCCTGCTTGCTGGCCTGGATAAATCTGCTAAGCATATGTTAATCCCATATGTTCCGATGTTAGTACCACCAAAGAGATGGAAAGGATATGATAAGGGTGGTTACTTGTTTTTGCCTTCATATCTCATGCGTACTCACGGATCCAAGAAACAGCAAGATGCACTTAAAGATATTAGTTCCAAGACTGCTCATAGAGTTTTTGAGGCATTGGATACACTTGGGAACACCAAGTGGAGGGTCAATAGGAAAATACTTGATGTGGTGGAAAGGCTATGGGCTGATGGAGGCAACATTGCAGGCTTAGTTAATCGAGAAGACGTTCCCATACCAGATAAACCTTTATCTGAGGATCCAGAAGAACTCCAGTCATGGAAATGGAGTGTTAGAAAGGCCAAGAAGATTAACAGAGAGAGGCATTCTCTAAGATGTGATGTTGAGCTCAAGCTTTCTGTGGCTAGAAAAATGAAAGACGAGGAAGGATTCTACTACCCTCACAATCTCGACTTCAGGGGACGAGCATACCCAATGCACCCTCATCTGAACCATCTGAGTTCTGATCTTTGCCGTGGAACCCTGGAGTTTGCTGAAGGACGTCCACTTGGAAAGTCAGGCTTGTATTGGCTCAAAATACATTTAGCGAACCTCTACGCAGGTGGTGTCGAAAAGCTTTCACACGATGGGCGTCTTGCTTTTGTGGAAAACCATTTGGATGATATAATAGATTCAGCTGAAAATGCTATTCATGGGAAAAGATGGTGGTTGAAGGCTGAGGATCCTTTTCAGTGTTTGGCTGCATGTGTCATTCTGGCACAAGCCTTGAAAAGCCCTTCACCTTGTTCTGTAATCTCCAACTTGCCTATCCATCAGGATGGGTCGTGCAATGGTCTACAGCATTATGCAGCTTTAGGAAGAGATAGTTTTGAAGCTGCAGCAGTTAATCTAGTTGCGGGAGAAAAACCAGCTGATGTCTATTCTGAAATTTCATTGAGGGTCCATGAAATAATGAAGAAGGACAGCAGTAAGGATCCTGAGTCAAACCCAACCGCCGCATTAGCAAAGATCCTTATCAATCAAGTGGACAGGAAGCTGGTAAAGCAGACGGTAATGACGTCAGTATATGGTGTTACCTATGTTGGAGCGCGTGAACAGATAAAAAAAAGATTAGAAGAGAAAGGTGTTATCACTGACGAGAGAATGCTATTTGCTGCTGCTTGCTATTCTGCTAAAGTGACACTAGCAGCCCTTGGAGAGATATTTGAAGCGGCACGTGCCATTATGAGTTGGCTTGGTGATTGTGCTAAGATAATAGCTTCTGATAACCATCCAGTGCGATGGACCACGCCTCTTGGACTTCCTGTTGTGCAACCCTATTGCAGAAGTGAAAGACATCTGATAAGAACATCTCTTCAAGTTTTAGCTCTGCAGCGAGAGGGTAACACGGTGGATGTTAGGAAACAAAGAACTGCGTTTCCTCCAAACTTTGTGCACTCGCTGGACGGCACTCACATGATGATGACTGCTGTTGCATGTCGAGAGGCTGGCCTAAACTTCGCAGGTGTGCATGACTCCTACTGGACGCATGCATGTGACGTTGACACAATGAACAGAATACTTAGAGAAAAATTCGTTGAGCTTTACAGCACACCGATCCTTGAAGACTTACTCCAAAGTTTCCAAGAGTCATACCCGAATCTCGTGTTTCCTCCAGTGCCACAGAGAGGTGACTTTGATTTAAAGGAAGTGCTCAAATCACACTACTTTTTCAACTGA
Protein:  
MASPAAPSPPSLSLNHTSHFQHRTSLITWLKPPPPSSSSLFRRRPLLLPISASSSSSTSLSITKGATLIEDPVERNELSARRRLFTQDPPWISALFLKGLTRTLDQTLKLERQDMGKRKFDSLRRRQVKEETEAWEKTVEEYRDLEKEMCEKSLAPNLPYVKHMFLGWFQPLKDVIEREQRLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQVVQAAVSIGIAIEHEVRIHNFLKRTRKSNTGDSQEEVKDKQLLRKRVNSLIRRKRIIDALKVVKSEGIKPWGRATQAKLGSRLLELLIETAYVQPPLTQSGDSIPEVRPAFRHKFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLPSYLMRTHGSKKQQDALKDISSKTAHRVFEALDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVPIPDKPLSEDPEELQSWKWSVRKAKKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDDIIDSAENAIHGKRWWLKAEDPFQCLAACVILAQALKSPSPCSVISNLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISLRVHEIMKKDSSKDPESNPTAALAKILINQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWTTPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYSTPILEDLLQSFQESYPNLVFPPVPQRGDFDLKEVLKSHYFFN